PF00709


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00709, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00709
Description Adenylosuccinate synthetase

Occurence in the database

PF00709 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1369 FBDBKF_08475 75775 77073 1 purA adenylosuccinate synthase Morganella morganii S1
1 group_1369 EHELCC_13050 86652 87950 -1 purA adenylosuccinate synthase Morganella morganii S2
2 group_1369 NLDBIP_13390 86652 87989 -1 purA adenylosuccinate synthase Morganella morganii S4
3 group_1369 LHKJJB_13165 74493 75791 1 purA adenylosuccinate synthase Morganella morganii S3
4 group_1369 HKOGLL_11865 86652 87950 -1 purA adenylosuccinate synthase Morganella morganii S5
5 group_1369 F4V73_RS09695 41961 43259 1 adenylosuccinate synthase Morganella psychrotolerans
6 group_1369 PMI_RS16770 3697109 3698407 1 adenylosuccinate synthase Proteus mirabilis HI4320