PF00670


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00670, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00670
Description S-adenosyl-L-homocysteine hydrolase, NAD binding domain

Occurence in the database

PF00670 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2538 FBDBKF_02450 184156 185403 1 ahcY adenosylhomocysteinase Morganella morganii S1
1 group_2538 EHELCC_02920 571976 573223 1 ahcY adenosylhomocysteinase Morganella morganii S2
2 group_2538 NLDBIP_00540 106913 108160 -1 ahcY adenosylhomocysteinase Morganella morganii S4
3 group_2538 LHKJJB_01495 284525 285772 1 ahcY adenosylhomocysteinase Morganella morganii S3
4 group_2538 HKOGLL_01535 290036 291283 1 ahcY adenosylhomocysteinase Morganella morganii S5
5 group_2538 F4V73_RS04825 1025427 1026674 1 adenosylhomocysteinase Morganella psychrotolerans