PF00668


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00668, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00668
Description Condensation domain

Occurence in the database

PF00668 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3015 FBDBKF_17880 1296 7400 1 tam Trans-aconitate methyltransferase Morganella morganii S1
1 group_3016 FBDBKF_17885 7413 16628 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S1
2 group_3016 EHELCC_06450 19748 28963 -1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S2
3 group_3015 EHELCC_06455 28976 35080 -1 tam Trans-aconitate methyltransferase Morganella morganii S2
4 group_3016 NLDBIP_06770 19621 28836 -1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S4
5 group_3015 NLDBIP_06775 28849 34953 -1 tam Trans-aconitate methyltransferase Morganella morganii S4
6 group_3015 LHKJJB_18885 1304 7408 1 tam Trans-aconitate methyltransferase Morganella morganii S3
7 group_3016 LHKJJB_18890 7421 16636 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S3
8 group_3015 HKOGLL_04615 234688 240792 1 tam Trans-aconitate methyltransferase Morganella morganii S5
9 group_3016 HKOGLL_04620 240805 250020 1 pksD Acyl transferase domain in polyketide synthase (PKS) enzymes Morganella morganii S5
10 group_3015 PMI_RS12835 2834947 2841051 1 non-ribosomal peptide synthetase Proteus mirabilis HI4320
11 group_3016 PMI_RS12840 2841064 2850279 1 type I polyketide synthase Proteus mirabilis HI4320