PF00585


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00585, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00585
Description C-terminal regulatory domain of Threonine dehydratase

Occurence in the database

PF00585 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1321 FBDBKF_08180 10140 11708 1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S1
1 group_1321 EHELCC_13345 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S2
2 group_1321 NLDBIP_13685 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S4
3 group_1321 LHKJJB_12870 8858 10426 1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S3
4 group_1321 HKOGLL_12160 152017 153585 -1 ilvA threonine ammonia-lyase, biosynthetic Morganella morganii S5
5 group_1321 F4V73_RS18710 9098 10663 1 ilvA threonine ammonia-lyase, biosynthetic Morganella psychrotolerans
6 group_1321 PMI_RS16420 3620735 3622309 1 ilvA threonine ammonia-lyase, biosynthetic Proteus mirabilis HI4320