PF00484


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00484, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00484
Description Carbonic anhydrase

Occurence in the database

PF00484 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1301 FBDBKF_07960 123470 124129 -1 can carbonate dehydratase Morganella morganii S1
1 group_1301 EHELCC_13790 97664 98323 -1 can carbonate dehydratase Morganella morganii S2
2 group_1301 NLDBIP_14235 118539 119198 -1 can carbonate dehydratase Morganella morganii S4
3 group_1301 LHKJJB_08615 40551 41210 1 can carbonate dehydratase Morganella morganii S3
4 group_1301 HKOGLL_08165 40551 41210 1 can carbonate dehydratase Morganella morganii S5
5 group_1301 F4V73_RS13025 219152 219811 1 can carbonate dehydratase Morganella psychrotolerans
6 group_1301 PMI_RS00780 198044 198697 -1 can carbonate dehydratase Proteus mirabilis HI4320