PF00475


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00475, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00475
Description Imidazoleglycerol-phosphate dehydratase

Occurence in the database

PF00475 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1197 FBDBKF_06915 47317 48384 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S1
1 group_1197 EHELCC_04055 137802 138869 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S2
2 group_1197 NLDBIP_04055 137598 138665 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S4
3 group_1197 LHKJJB_09885 137712 138779 1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S3
4 group_1197 HKOGLL_09090 52273 53340 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella morganii S5
5 group_1197 F4V73_RS01100 232248 233315 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Morganella psychrotolerans
6 group_1197 PMI_RS03260 719743 720810 -1 hisB bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB Proteus mirabilis HI4320