PF00455


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00455, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00455
Description DeoR C terminal sensor domain

Occurence in the database

PF00455 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_263 FBDBKF_04745 151171 151980 -1 glpR DeoR family transcriptional regulator Morganella morganii S1
1 group_1620 FBDBKF_10685 105539 106297 -1 glpR DeoR/GlpR family transcriptional regulator Morganella morganii S1
2 group_2909 FBDBKF_13575 92680 93450 -1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S1
3 group_2921 FBDBKF_13790 51865 52620 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S1
4 group_263 EHELCC_06035 210628 211437 -1 glpR DeoR family transcriptional regulator Morganella morganii S2
5 group_2909 EHELCC_08520 181741 182511 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S2
6 group_2921 EHELCC_11460 136741 137496 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S2
7 group_1620 EHELCC_15020 105529 106287 -1 glpR DeoR/GlpR family transcriptional regulator Morganella morganii S2
8 group_263 NLDBIP_06355 251693 252502 -1 glpR DeoR family transcriptional regulator Morganella morganii S4
9 group_2909 NLDBIP_08845 181741 182511 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S4
10 group_2921 NLDBIP_11805 136741 137496 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S4
11 group_1620 NLDBIP_14850 105529 106287 -1 glpR DeoR/GlpR family transcriptional regulator Morganella morganii S4
12 group_263 LHKJJB_03235 229217 230026 -1 glpR DeoR family transcriptional regulator Morganella morganii S3
13 group_2909 LHKJJB_05420 74648 75418 -1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S3
14 group_2921 LHKJJB_11665 136741 137496 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S3
15 group_1620 LHKJJB_14495 35439 36197 1 glpR DeoR/GlpR family transcriptional regulator Morganella morganii S3
16 group_2909 HKOGLL_05495 166332 167102 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S5
17 group_263 HKOGLL_06710 151081 151890 -1 glpR DeoR family transcriptional regulator Morganella morganii S5
18 group_2921 HKOGLL_10275 136741 137496 1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family Morganella morganii S5
19 group_1620 HKOGLL_13115 35439 36197 1 glpR DeoR/GlpR family transcriptional regulator Morganella morganii S5
20 group_2909 F4V73_RS03190 680830 681600 1 DeoR/GlpR family DNA-binding transcription regulator Morganella psychrotolerans
21 group_263 F4V73_RS09215 1930799 1931608 -1 DeoR family transcriptional regulator Morganella psychrotolerans
22 group_2921 F4V73_RS12660 130010 130897 1 DeoR/GlpR family DNA-binding transcription regulator Morganella psychrotolerans
23 group_1620 F4V73_RS14400 108752 109513 -1 DeoR/GlpR family transcriptional regulator Morganella psychrotolerans
24 group_263 PMI_RS10550 2320179 2320958 -1 agaR transcriptional repressor AgaR Proteus mirabilis HI4320
25 group_1620 PMI_RS14480 3210629 3211387 1 DeoR/GlpR family transcriptional regulator Proteus mirabilis HI4320
26 group_263 PMI_RS17455 3831482 3832258 -1 DeoR family transcriptional regulator Proteus mirabilis HI4320