PF00302


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00302, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00302
Description Chloramphenicol acetyltransferase

Occurence in the database

PF00302 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1664 FBDBKF_11555 107555 108196 1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII Morganella morganii S1
1 group_1664 EHELCC_17475 5898 6539 1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII Morganella morganii S2
2 group_1664 NLDBIP_18685 6645 7286 1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII Morganella morganii S4
3 group_1664 LHKJJB_17915 5898 6539 1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII Morganella morganii S3
4 group_1664 HKOGLL_18735 17692 18333 -1 catA2 type A-2 chloramphenicol O-acetyltransferase CatII Morganella morganii S5
5 group_1664 F4V73_RS08120 1685512 1686153 -1 catA type A chloramphenicol O-acetyltransferase Morganella psychrotolerans
6 group_1664 PMI_RS03580 802273 802926 -1 catA type A chloramphenicol O-acetyltransferase Proteus mirabilis HI4320