PF00248


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00248, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00248
Description Aldo/keto reductase family

Occurence in the database

PF00248 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1123 FBDBKF_06410 117049 117873 1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella morganii S1
1 group_1123 EHELCC_09455 117621 118445 1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella morganii S2
2 group_1123 NLDBIP_09835 117621 118445 1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella morganii S4
3 group_1123 LHKJJB_07920 98793 99617 -1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella morganii S3
4 group_1123 HKOGLL_07470 98793 99617 -1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella morganii S5
5 group_3850 F4V73_RS10235 157262 158065 -1 dkgB 2,5-didehydrogluconate reductase DkgB Morganella psychrotolerans
6 group_1123 F4V73_RS15515 96104 96928 -1 dkgA 2,5-didehydrogluconate reductase DkgA Morganella psychrotolerans
7 group_1123 PMI_RS00115 44615 45445 -1 dkgA 2,5-didehydrogluconate reductase DkgA Proteus mirabilis HI4320
8 group_3850 PMI_RS03940 887460 888263 -1 dkgB 2,5-didehydrogluconate reductase DkgB Proteus mirabilis HI4320