PF00145


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00145, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00145
Description C-5 cytosine-specific DNA methylase

Occurence in the database

PF00145 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_415 FBDBKF_18070 14718 15839 -1 dcm DNA-cytosine methylase Morganella morganii S1
1 group_415 EHELCC_16770 14718 15839 -1 dcm DNA-cytosine methylase Morganella morganii S2
2 group_415 NLDBIP_17680 39927 41048 1 dcm DNA-cytosine methylase Morganella morganii S4
3 group_415 LHKJJB_17600 39927 41048 1 dcm DNA-cytosine methylase Morganella morganii S3
4 group_415 HKOGLL_17415 39927 41048 1 dcm DNA-cytosine methylase Morganella morganii S5
5 group_415 F4V73_RS02270 478246 479334 1 DNA cytosine methyltransferase Morganella psychrotolerans
6 group_4048 F4V73_RS06310 1315239 1316153 1 DNA cytosine methyltransferase Morganella psychrotolerans
7 group_415 F4V73_RS10160 142993 144420 1 DNA cytosine methyltransferase Morganella psychrotolerans
8 group_415 F4V73_RS10225 154934 156055 -1 DNA cytosine methyltransferase Morganella psychrotolerans