PF00119


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00119, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00119
Description ATP synthase A chain

Occurence in the database

PF00119 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2066 FBDBKF_15465 19176 20000 1 atpB F0F1 ATP synthase subunit A Morganella morganii S1
1 group_2066 EHELCC_15825 18476 19300 1 atpB F0F1 ATP synthase subunit A Morganella morganii S2
2 group_2066 NLDBIP_16545 61363 62187 -1 atpB F0F1 ATP synthase subunit A Morganella morganii S4
3 group_2066 LHKJJB_16260 18476 19300 1 atpB F0F1 ATP synthase subunit A Morganella morganii S3
4 group_2066 HKOGLL_16030 18476 19300 1 atpB F0F1 ATP synthase subunit A Morganella morganii S5
5 group_2066 F4V73_RS17680 177143 177967 -1 atpB F0F1 ATP synthase subunit A Morganella psychrotolerans
6 group_2066 PMI_RS15145 3361826 3362650 1 atpB F0F1 ATP synthase subunit A Proteus mirabilis HI4320