PF00092


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00092, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00092
Description von Willebrand factor type A domain

Occurence in the database

PF00092 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2489 FBDBKF_01595 12997 13719 -1 terY Uncharacterized conserved protein YegL, contains vWA domain of TerY type Morganella morganii S1
1 group_2489 EHELCC_02065 400817 401539 -1 terY Uncharacterized conserved protein YegL, contains vWA domain of TerY type Morganella morganii S2
2 group_2489 NLDBIP_01395 278597 279319 1 terY Uncharacterized conserved protein YegL, contains vWA domain of TerY type Morganella morganii S4
3 group_2489 LHKJJB_00640 113366 114088 -1 terY Uncharacterized conserved protein YegL, contains vWA domain of TerY type Morganella morganii S3
4 group_2489 HKOGLL_00680 118877 119599 -1 terY Uncharacterized conserved protein YegL, contains vWA domain of TerY type Morganella morganii S5
5 group_4120 F4V73_RS10190 149157 150503 -1 VWA domain-containing protein Morganella psychrotolerans
6 group_3865 PMI_RS12070 2669258 2670913 -1 VWA domain-containing protein Proteus mirabilis HI4320