K14415


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K14415
Protein list: lists the 5 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K14415
KO K14415
Description tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K14415 is associated with 5 different proteins
The 5 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3282 FBDBKF_08865 154292 155518 1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S1
1 group_3282 EHELCC_12660 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S2
2 group_3282 NLDBIP_13000 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S4
3 group_3282 LHKJJB_13555 153010 154236 1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S3
4 group_3282 HKOGLL_11475 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S5