K14415


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K14415, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K14415
KO K14415
Description tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K14415 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3281 FBDBKF_08865 154292 155518 1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S1
1 group_3281 EHELCC_12660 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S2
2 group_3281 NLDBIP_13000 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S4
3 group_3281 LHKJJB_13555 153010 154236 1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S3
4 group_3281 HKOGLL_11475 8207 9433 -1 rtcB RNA-splicing ligase RtcB, repairs tRNA damage Morganella morganii S5