K10557


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10557, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10557
KO K10557
Description AI-2 transport system permease protein

KO part of 2 pathways

ABC transporters
Quorum sensing

KO part of 0 modules

Occurence in the database

K10557 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2518 FBDBKF_02180 124812 125816 -1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella morganii S1
1 group_2518 EHELCC_02650 512632 513636 -1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella morganii S2
2 group_2518 NLDBIP_00810 166500 167504 1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella morganii S4
3 group_2518 LHKJJB_01225 225181 226185 -1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella morganii S3
4 group_2518 HKOGLL_01265 230692 231696 -1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella morganii S5
5 group_2518 F4V73_RS04550 961473 962468 -1 lsrD autoinducer 2 ABC transporter permease LsrD Morganella psychrotolerans