K10556


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10556, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10556
KO K10556
Description AI-2 transport system permease protein

KO part of 2 pathways

ABC transporters
Quorum sensing

KO part of 0 modules

Occurence in the database

K10556 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2519 FBDBKF_02185 125813 126817 -1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella morganii S1
1 group_2519 EHELCC_02655 513633 514637 -1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella morganii S2
2 group_2519 NLDBIP_00805 165499 166503 1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella morganii S4
3 group_2519 LHKJJB_01230 226182 227186 -1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella morganii S3
4 group_2519 HKOGLL_01270 231693 232697 -1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella morganii S5
5 group_2519 F4V73_RS04555 962474 963478 -1 lsrC autoinducer 2 ABC transporter permease LsrC Morganella psychrotolerans