K09748


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K09748, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K09748
KO K09748
Description ribosome maturation factor RimP

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K09748 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1402 PMI_RS17015 3742706 3743158 1 rimP ribosome maturation factor RimP Proteus mirabilis HI4320
1 group_1402 FBDBKF_08660 112387 112869 1 rimP ribosome maturation factor RimP Morganella morganii S1
2 group_1402 EHELCC_12865 50856 51338 -1 rimP ribosome maturation factor RimP Morganella morganii S2
3 group_1402 NLDBIP_13205 50856 51338 -1 rimP ribosome maturation factor RimP Morganella morganii S4
4 group_1402 LHKJJB_13350 111105 111587 1 rimP ribosome maturation factor RimP Morganella morganii S3
5 group_1402 HKOGLL_11680 50856 51338 -1 rimP ribosome maturation factor RimP Morganella morganii S5
6 group_1402 F4V73_RS09885 79580 80032 1 rimP ribosome maturation factor RimP Morganella psychrotolerans