K05788


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05788, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05788
KO K05788
Description integration host factor subunit beta

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05788 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1230 PMI_RS03520 785456 785743 1 ihfB integration host factor subunit beta Proteus mirabilis HI4320
1 group_1230 FBDBKF_07165 105962 106246 1 ihfB integration host factor subunit beta Morganella morganii S1
2 group_1230 EHELCC_03805 79940 80224 -1 ihfB integration host factor subunit beta Morganella morganii S2
3 group_1230 NLDBIP_03805 79736 80020 -1 ihfB integration host factor subunit beta Morganella morganii S4
4 group_1230 LHKJJB_09635 79850 80134 -1 ihfB integration host factor subunit beta Morganella morganii S3
5 group_1230 HKOGLL_09340 110918 111202 1 ihfB integration host factor subunit beta Morganella morganii S5
6 group_1230 F4V73_RS01350 293983 294267 1 ihfB integration host factor subunit beta Morganella psychrotolerans