K05590


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05590, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05590
KO K05590
Description ATP-dependent RNA helicase SrmB [EC:3.6.4.13]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05590 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_235 PMI_RS09360 2042522 2043877 1 srmB ATP-dependent RNA helicase SrmB Proteus mirabilis HI4320
1 group_235 FBDBKF_01470 292494 293840 1 srmB ATP-dependent RNA helicase SrmB Morganella morganii S1
2 group_235 EHELCC_00075 15028 16374 -1 srmB ATP-dependent RNA helicase SrmB Morganella morganii S2
3 group_235 NLDBIP_03385 663762 665108 1 srmB ATP-dependent RNA helicase SrmB Morganella morganii S4
4 group_235 LHKJJB_04900 271003 272349 1 srmB ATP-dependent RNA helicase SrmB Morganella morganii S3
5 group_235 HKOGLL_02145 15233 16579 -1 srmB ATP-dependent RNA helicase SrmB Morganella morganii S5
6 group_235 F4V73_RS01935 422802 424154 -1 srmB ATP-dependent RNA helicase SrmB Morganella psychrotolerans