K03550


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03550, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03550
KO K03550
Description holliday junction DNA helicase RuvA

KO part of 1 pathways

Homologous recombination

KO part of 0 modules

Occurence in the database

K03550 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_635 PMI_RS05410 1183518 1184141 1 ruvA Holliday junction branch migration protein RuvA Proteus mirabilis HI4320
1 group_635 FBDBKF_02060 100420 101034 1 ruvA Holliday junction branch migration protein RuvA Morganella morganii S1
2 group_635 EHELCC_02530 488240 488854 1 ruvA Holliday junction branch migration protein RuvA Morganella morganii S2
3 group_635 NLDBIP_00930 191282 191896 -1 ruvA Holliday junction branch migration protein RuvA Morganella morganii S4
4 group_635 LHKJJB_01105 200789 201403 1 ruvA Holliday junction branch migration protein RuvA Morganella morganii S3
5 group_635 HKOGLL_01145 206300 206914 1 ruvA Holliday junction branch migration protein RuvA Morganella morganii S5
6 group_635 F4V73_RS04425 936257 936871 1 ruvA Holliday junction branch migration protein RuvA Morganella psychrotolerans