K03215


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03215, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03215
KO K03215
Description 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K03215 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1874 PMI_RS01040 256105 257430 1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Proteus mirabilis HI4320
1 group_1874 FBDBKF_13990 94602 95984 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella morganii S1
2 group_1874 EHELCC_11665 179478 180860 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella morganii S2
3 group_1874 NLDBIP_12005 179478 180860 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella morganii S4
4 group_1874 LHKJJB_11865 179478 180860 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella morganii S3
5 group_1874 HKOGLL_10480 179478 180860 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella morganii S5
6 group_1874 F4V73_RS12845 172118 173458 -1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Morganella psychrotolerans