K03043


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03043, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03043
KO K03043
Description DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

KO part of 1 pathways

RNA polymerase

KO part of 0 modules

Occurence in the database

K03043 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2289 PMI_RS13755 3057814 3061842 -1 rpoB DNA-directed RNA polymerase subunit beta Proteus mirabilis HI4320
1 group_2289 FBDBKF_17580 4838 8866 1 rpoB DNA-directed RNA polymerase subunit beta Morganella morganii S1
2 group_2289 EHELCC_18065 4214 8242 1 rpoB DNA-directed RNA polymerase subunit beta Morganella morganii S2
3 group_2289 NLDBIP_18085 30495 34523 -1 rpoB DNA-directed RNA polymerase subunit beta Morganella morganii S4
4 group_2289 LHKJJB_18280 30495 34523 -1 rpoB DNA-directed RNA polymerase subunit beta Morganella morganii S3
5 group_2289 HKOGLL_17920 4214 8242 1 rpoB DNA-directed RNA polymerase subunit beta Morganella morganii S5
6 group_2289 F4V73_RS14960 223395 227423 1 rpoB DNA-directed RNA polymerase subunit beta Morganella psychrotolerans