K01997
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01997, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs
within the database. 6 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.
Description
External link |
K01997 |
KO |
K01997 |
Description |
branched-chain amino acid transport system permease protein |
KO part of 2 pathways
KO part of 0 modules
Occurence in the database
K01997 is associated with 6 different proteins (see tab "Protein list" and "Profile") |
The 6 proteins are classified into 1 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_2607 |
FBDBKF_03475 |
100485 |
101411 |
-1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella morganii S1 |
1 |
group_2607 |
EHELCC_07060 |
145692 |
146618 |
1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella morganii S2 |
2 |
group_2607 |
NLDBIP_07385 |
145565 |
146491 |
1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella morganii S4 |
3 |
group_2607 |
LHKJJB_06920 |
109311 |
110237 |
1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella morganii S3 |
4 |
group_2607 |
HKOGLL_04010 |
123150 |
124076 |
-1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella morganii S5 |
5 |
group_2607 |
F4V73_RS11420 |
427254 |
428180 |
1 |
livH |
high-affinity branched-chain amino acid ABC transporter permease LivH |
Morganella psychrotolerans |