K01929


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01929, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01929
KO K01929
Description UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]

Occurence in the database

K01929 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_861 PMI_RS10220 2237926 2239308 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase Proteus mirabilis HI4320
1 group_861 FBDBKF_04355 60205 61578 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase Morganella morganii S1
2 group_861 EHELCC_05645 119662 121035 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase Morganella morganii S2
3 group_861 NLDBIP_05965 160727 162100 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase Morganella morganii S4
4 group_861 LHKJJB_02845 138251 139624 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase Morganella morganii S3
5 group_861 HKOGLL_06320 60115 61488 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase Morganella morganii S5
6 group_861 F4V73_RS08800 1821325 1822698 -1 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase Morganella psychrotolerans