K00940


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00940, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00940
KO K00940
Description nucleoside-diphosphate kinase [EC:2.7.4.6]

KO part of 8 pathways

Purine metabolism
Pyrimidine metabolism
Drug metabolism - other enzymes
Metabolic pathways
Biosynthesis of secondary metabolites
Nucleotide metabolism
Biosynthesis of cofactors
MAPK signaling pathway - plant

KO part of 5 modules

M00049 Purine metabolism Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
M00050 Purine metabolism Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
M00052 Pyrimidine metabolism Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
M00053 Purine metabolism Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
M00938 Pyrimidine metabolism Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP

Occurence in the database

K00940 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_515 PMI_RS09125 1986624 1987049 -1 ndk nucleoside-diphosphate kinase Proteus mirabilis HI4320
1 group_515 FBDBKF_01080 196733 197158 -1 ndk nucleoside-diphosphate kinase Morganella morganii S1
2 group_515 EHELCC_00465 111710 112135 1 ndk nucleoside-diphosphate kinase Morganella morganii S2
3 group_515 NLDBIP_02995 568001 568426 -1 ndk nucleoside-diphosphate kinase Morganella morganii S4
4 group_515 LHKJJB_04510 175242 175667 -1 ndk nucleoside-diphosphate kinase Morganella morganii S3
5 group_515 HKOGLL_02535 111915 112340 1 ndk nucleoside-diphosphate kinase Morganella morganii S5
6 group_515 F4V73_RS07150 1484605 1485030 -1 ndk nucleoside-diphosphate kinase Morganella psychrotolerans