K00611


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00611, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00611
KO K00611
Description ornithine carbamoyltransferase [EC:2.1.3.3]

KO part of 4 pathways

Arginine biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids

KO part of 2 modules

M00029 Arginine and proline metabolism Urea cycle
M00844 Arginine and proline metabolism Arginine biosynthesis, ornithine => arginine

Occurence in the database

K00611 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1426 PMI_RS17230 3783274 3784278 -1 argF ornithine carbamoyltransferase Proteus mirabilis HI4320
1 group_1426 LHKJJB_13505 141400 142413 -1 argF ornithine carbamoyltransferase Morganella morganii S3
2 group_1426 HKOGLL_11525 20030 21043 1 argF ornithine carbamoyltransferase Morganella morganii S5
3 group_1426 EHELCC_12710 20030 21043 1 argF ornithine carbamoyltransferase Morganella morganii S2
4 group_1426 NLDBIP_13050 20030 21043 1 argF ornithine carbamoyltransferase Morganella morganii S4
5 group_1426 FBDBKF_08815 142682 143695 -1 argF ornithine carbamoyltransferase Morganella morganii S1
6 group_1426 F4V73_RS10035 113268 114281 -1 argF ornithine carbamoyltransferase Morganella psychrotolerans