K00557


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K00557, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K00557
KO K00557
Description tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K00557 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1641 PMI_RS16045 3565442 3566539 -1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Proteus mirabilis HI4320
1 group_1641 FBDBKF_10850 137213 138313 -1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella morganii S1
2 group_1641 EHELCC_19435 7999 9099 -1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella morganii S2
3 group_1641 NLDBIP_15015 137203 138303 -1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella morganii S4
4 group_1641 LHKJJB_14330 3423 4523 1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella morganii S3
5 group_1641 HKOGLL_12950 3423 4523 1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella morganii S5
6 group_1641 F4V73_RS16900 3301 4398 1 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA Morganella psychrotolerans