COG4922


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4922, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted SnoaL-like aldol condensation-catalyzing enzyme
Function(s) descr. General function prediction only (R)

Occurence in the database

COG4922 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2654 FBDBKF_04555 106388 106777 -1 Nuclear transport factor 2 family protein Morganella morganii S1
1 group_2654 EHELCC_05845 165845 166234 -1 Nuclear transport factor 2 family protein Morganella morganii S2
2 group_2654 NLDBIP_06165 206910 207299 -1 Nuclear transport factor 2 family protein Morganella morganii S4
3 group_2654 LHKJJB_03045 184434 184823 -1 Nuclear transport factor 2 family protein Morganella morganii S3
4 group_2654 HKOGLL_06520 106298 106687 -1 Nuclear transport factor 2 family protein Morganella morganii S5