COG4857


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4857, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 5-Methylthioribose/5-deoxyribose kinase, methionine salvage pathway
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4857 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2660 FBDBKF_04635 126379 127644 1 mtnK S-methyl-5-thioribose kinase Morganella morganii S1
1 group_2660 EHELCC_05925 185836 187101 1 mtnK S-methyl-5-thioribose kinase Morganella morganii S2
2 group_2660 NLDBIP_06245 226901 228166 1 mtnK S-methyl-5-thioribose kinase Morganella morganii S4
3 group_2660 LHKJJB_03125 204425 205690 1 mtnK S-methyl-5-thioribose kinase Morganella morganii S3
4 group_2660 HKOGLL_06600 126289 127554 1 mtnK S-methyl-5-thioribose kinase Morganella morganii S5
5 group_2660 F4V73_RS09085 1899973 1901238 1 mtnK S-methyl-5-thioribose kinase Morganella psychrotolerans