COG4811


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4811, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein YobD, UPF0266 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG4811 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2490 FBDBKF_01615 16746 17204 -1 yobD DUF986 domain-containing protein Morganella morganii S1
1 group_2490 EHELCC_02085 404566 405024 -1 yobD DUF986 domain-containing protein Morganella morganii S2
2 group_2490 NLDBIP_01375 275112 275570 1 yobD DUF986 domain-containing protein Morganella morganii S4
3 group_2490 LHKJJB_00660 117115 117573 -1 yobD DUF986 domain-containing protein Morganella morganii S3
4 group_2490 HKOGLL_00700 122626 123084 -1 yobD DUF986 domain-containing protein Morganella morganii S5
5 group_2490 F4V73_RS03955 839811 840269 -1 DUF986 family protein Morganella psychrotolerans