COG4672

Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4672, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 25 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phage tail protein
Function(s) descr. Mobilome: prophages, transposons (X)

Occurence in the database

COG4672 is associated with 25 different proteins (see tab "Protein list" and "Profile")
The 25 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_36 FBDBKF_00050 8719 9417 -1 phage minor tail protein L Morganella morganii S1
1 group_36 FBDBKF_11495 95312 96010 1 phage minor tail protein L Morganella morganii S1
2 group_36 FBDBKF_13050 4173 4871 -1 phage minor tail protein L Morganella morganii S1
3 group_132 FBDBKF_18575 4890 5648 -1 gp18 phage minor tail protein L Morganella morganii S1
4 group_132 FBDBKF_19345 3202 3960 -1 gp18 phage minor tail protein L Morganella morganii S1
5 group_36 EHELCC_01495 299451 300149 1 phage minor tail protein L Morganella morganii S2
6 group_132 EHELCC_15150 4890 5648 -1 gp18 phage minor tail protein L Morganella morganii S2
7 group_36 EHELCC_17720 4705 5403 -1 phage minor tail protein L Morganella morganii S2
8 group_132 EHELCC_19315 9443 10201 1 gp18 phage minor tail protein L Morganella morganii S2
9 group_36 NLDBIP_01965 379987 380685 -1 phage minor tail protein L Morganella morganii S4
10 group_36 NLDBIP_05050 4531 5229 -1 phage minor tail protein L Morganella morganii S4
11 group_132 NLDBIP_15680 4890 5648 -1 gp18 phage minor tail protein L Morganella morganii S4
12 group_132 NLDBIP_19445 9443 10201 1 gp18 phage minor tail protein L Morganella morganii S4
13 group_36 LHKJJB_00070 12000 12698 1 phage minor tail protein L Morganella morganii S3
14 group_132 LHKJJB_16160 111038 111796 1 gp18 phage minor tail protein L Morganella morganii S3
15 group_36 LHKJJB_19165 4192 4890 -1 phage minor tail protein L Morganella morganii S3
16 group_132 LHKJJB_19360 3202 3960 -1 gp18 phage minor tail protein L Morganella morganii S3
17 group_36 HKOGLL_00110 17511 18209 1 phage minor tail protein L Morganella morganii S5
18 group_36 HKOGLL_06020 254911 255609 1 phage minor tail protein L Morganella morganii S5
19 group_132 HKOGLL_15280 110250 111008 1 gp18 phage minor tail protein L Morganella morganii S5
20 group_36 HKOGLL_15310 5495 6193 -1 phage minor tail protein L Morganella morganii S5
21 group_132 HKOGLL_19250 9443 10201 1 gp18 phage minor tail protein L Morganella morganii S5
22 group_36 F4V73_RS02230 469993 470688 1 phage minor tail protein L Morganella psychrotolerans
23 group_36 F4V73_RS18175 78246 78953 -1 phage minor tail protein L Morganella psychrotolerans
24 group_132 PMI_RS02595 566382 567125 1 phage minor tail protein L Proteus mirabilis HI4320