COG4623


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4623, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Membrane-bound lytic murein transglycosylase MltF
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)
Signal transduction mechanisms (T)

Occurence in the database

COG4623 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_538 FBDBKF_01235 237280 238719 1 mltF membrane-bound lytic murein transglycosylase MltF Morganella morganii S1
1 group_538 EHELCC_00310 70149 71588 -1 mltF membrane-bound lytic murein transglycosylase MltF Morganella morganii S2
2 group_538 NLDBIP_03150 608548 609987 1 mltF membrane-bound lytic murein transglycosylase MltF Morganella morganii S4
3 group_538 LHKJJB_04665 215789 217228 1 mltF membrane-bound lytic murein transglycosylase MltF Morganella morganii S3
4 group_538 HKOGLL_02380 70354 71793 -1 mltF membrane-bound lytic murein transglycosylase MltF Morganella morganii S5
5 group_538 F4V73_RS07275 1518159 1519604 1 mltF membrane-bound lytic murein transglycosylase MltF Morganella psychrotolerans
6 group_538 PMI_RS09260 2022527 2023996 1 mltF membrane-bound lytic murein transglycosylase MltF Proteus mirabilis HI4320