COG4525


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4525, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type taurine transport system, ATPase component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4525 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2595 FBDBKF_03165 37199 37972 1 tauB ABC-type taurine transport system, ATPase component Morganella morganii S1
1 group_2595 EHELCC_07370 209131 209904 -1 tauB ABC-type taurine transport system, ATPase component Morganella morganii S2
2 group_2595 NLDBIP_07695 209004 209777 -1 tauB ABC-type taurine transport system, ATPase component Morganella morganii S4
3 group_2595 LHKJJB_07230 172750 173523 -1 tauB ABC-type taurine transport system, ATPase component Morganella morganii S3
4 group_2595 HKOGLL_03700 59864 60637 1 tauB ABC-type taurine transport system, ATPase component Morganella morganii S5
5 group_2595 F4V73_RS11755 499202 499975 -1 ATP-binding cassette domain-containing protein Morganella psychrotolerans