COG4460


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4460, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein, DUF4440 domain
Function(s) descr. Function unknown (S)

Occurence in the database

COG4460 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1510 FBDBKF_09770 48513 48920 -1 DUF4440 domain-containing protein Morganella morganii S1
1 group_1510 EHELCC_04570 240478 240885 -1 DUF4440 domain-containing protein Morganella morganii S2
2 group_1510 NLDBIP_04570 240274 240681 -1 DUF4440 domain-containing protein Morganella morganii S4
3 group_1510 LHKJJB_14060 94697 95104 1 DUF4440 domain-containing protein Morganella morganii S3
4 group_1510 HKOGLL_12475 49294 49701 -1 DUF4440 domain-containing protein Morganella morganii S5
5 group_1510 F4V73_RS00575 123693 124100 1 hypothetical protein Morganella psychrotolerans
6 group_1510 PMI_RS02845 627084 627491 1 hypothetical protein Proteus mirabilis HI4320