COG4192


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4192, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Signal transduction histidine kinase regulating phosphoglycerate transport system
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG4192 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1438 FBDBKF_09070 30003 32006 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S1
1 group_1438 EHELCC_10340 114098 116101 1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S2
2 group_1438 NLDBIP_10685 92369 94372 1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S4
3 group_1438 LHKJJB_10670 97156 99159 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S3
4 group_1438 HKOGLL_13730 30457 32460 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S5
5 group_1438 F4V73_RS10875 312776 314785 1 ATP-binding protein Morganella psychrotolerans
6 group_1438 PMI_RS11905 2628882 2631257 -1 ATP-binding protein Proteus mirabilis HI4320