COG3726


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3726, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein Smp affecting hemolysin expression
Function(s) descr. Function unknown (S)

Occurence in the database

COG3726 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1154 FBDBKF_06610 163742 164410 1 ahpA YtjB family periplasmic protein Morganella morganii S1
1 group_1154 EHELCC_09655 164314 164982 1 ahpA YtjB family periplasmic protein Morganella morganii S2
2 group_1154 NLDBIP_10035 164314 164982 1 ahpA YtjB family periplasmic protein Morganella morganii S4
3 group_1154 LHKJJB_07720 52256 52924 -1 ahpA YtjB family periplasmic protein Morganella morganii S3
4 group_1154 HKOGLL_07270 52256 52924 -1 ahpA YtjB family periplasmic protein Morganella morganii S5
5 group_1154 F4V73_RS15335 50737 51411 -1 YtjB family periplasmic protein Morganella psychrotolerans
6 group_1154 PMI_RS12395 2748420 2749112 1 YtjB family periplasmic protein Proteus mirabilis HI4320