COG3177


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3177, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fic family protein
Function(s) descr. Transcription (K)

Occurence in the database

COG3177 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2653 FBDBKF_04480 90052 91149 -1 Fic family protein Morganella morganii S1
1 group_3479 FBDBKF_16735 28958 30100 -1 Fido domain-containing protein Morganella morganii S1
2 group_2653 EHELCC_05770 149509 150606 -1 Fic family protein Morganella morganii S2
3 group_3479 EHELCC_10725 183671 184813 1 Fido domain-containing protein Morganella morganii S2
4 group_2653 NLDBIP_06090 190574 191671 -1 Fic family protein Morganella morganii S4
5 group_3479 NLDBIP_11070 161942 163084 1 Fido domain-containing protein Morganella morganii S4
6 group_2653 LHKJJB_02970 168098 169195 -1 Fic family protein Morganella morganii S3
7 group_3479 LHKJJB_10285 28444 29586 -1 Fido domain-containing protein Morganella morganii S3
8 group_2653 HKOGLL_06445 89962 91059 -1 Fic family protein Morganella morganii S5
9 group_3479 HKOGLL_16450 28453 29595 -1 Fido domain-containing protein Morganella morganii S5
10 group_2653 F4V73_RS04905 1042794 1043870 1 Fic family protein Morganella psychrotolerans