COG3162


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3162, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein, DUF485 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG3162 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1605 FBDBKF_10490 54792 55103 1 yjcH DUF485 domain-containing protein Morganella morganii S1
1 group_1605 EHELCC_14825 54782 55093 1 yjcH DUF485 domain-containing protein Morganella morganii S2
2 group_1605 NLDBIP_14655 54782 55093 1 yjcH DUF485 domain-containing protein Morganella morganii S4
3 group_1605 LHKJJB_14690 86633 86944 -1 yjcH DUF485 domain-containing protein Morganella morganii S3
4 group_1605 HKOGLL_13310 86633 86944 -1 yjcH DUF485 domain-containing protein Morganella morganii S5
5 group_1605 F4V73_RS14200 56658 56969 1 DUF485 domain-containing protein Morganella psychrotolerans
6 group_1605 PMI_RS15030 3335122 3335433 1 DUF485 domain-containing protein Proteus mirabilis HI4320