COG3080


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3080, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fumarate reductase subunit D
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG3080 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_781 FBDBKF_03615 128651 129007 1 frdD fumarate reductase subunit FrdD Morganella morganii S1
1 group_781 EHELCC_06920 118096 118452 -1 frdD fumarate reductase subunit FrdD Morganella morganii S2
2 group_781 NLDBIP_07245 117969 118325 -1 frdD fumarate reductase subunit FrdD Morganella morganii S4
3 group_781 LHKJJB_06780 81715 82071 -1 frdD fumarate reductase subunit FrdD Morganella morganii S3
4 group_781 HKOGLL_04150 151316 151672 1 frdD fumarate reductase subunit FrdD Morganella morganii S5
5 group_781 F4V73_RS11255 391782 392138 -1 frdD fumarate reductase subunit FrdD Morganella psychrotolerans
6 group_781 PMI_RS17835 3917000 3917359 -1 frdD fumarate reductase subunit FrdD Proteus mirabilis HI4320