COG3030


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3030, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3030 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_807 FBDBKF_03810 166224 166730 -1 fxsA FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family Morganella morganii S1
1 group_807 EHELCC_06725 80373 80879 1 fxsA FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family Morganella morganii S2
2 group_807 NLDBIP_07050 80246 80752 1 fxsA FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family Morganella morganii S4
3 group_807 LHKJJB_06585 43992 44498 1 fxsA FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family Morganella morganii S3
4 group_807 HKOGLL_04345 188889 189395 -1 fxsA FxsA protein affecting phage T7 exclusion by the F plasmid, UPF0716 family Morganella morganii S5
5 group_807 F4V73_RS11060 349704 350210 1 FxsA family protein Morganella psychrotolerans
6 group_807 PMI_RS12585 2788843 2789349 -1 FxsA family protein Proteus mirabilis HI4320