COG3006


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3006, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Chromosome condensin MukBEF, kleisin-like MukF subunit
Function(s) descr. Cell cycle control, cell division, chromosome partitioning (D)

Occurence in the database

COG3006 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1239 FBDBKF_07210 115164 116489 1 mukF chromosome partition protein MukF Morganella morganii S1
1 group_1239 EHELCC_03760 69697 71022 -1 mukF chromosome partition protein MukF Morganella morganii S2
2 group_1239 NLDBIP_03760 69493 70818 -1 mukF chromosome partition protein MukF Morganella morganii S4
3 group_1239 LHKJJB_09590 69607 70932 -1 mukF chromosome partition protein MukF Morganella morganii S3
4 group_1239 HKOGLL_09385 120120 121445 1 mukF chromosome partition protein MukF Morganella morganii S5
5 group_1239 F4V73_RS01395 303443 304768 1 mukF chromosome partition protein MukF Morganella psychrotolerans
6 group_1239 PMI_RS03565 795502 796824 1 mukF chromosome partition protein MukF Proteus mirabilis HI4320