COG2983


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2983, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized cysteine cluster protein YcgN, CxxCxxCC family
Function(s) descr. General function prediction only (R)

Occurence in the database

COG2983 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_658 FBDBKF_02265 142825 143271 1 ycgN YcgN family cysteine cluster protein Morganella morganii S1
1 group_658 EHELCC_02735 530645 531091 1 ycgN YcgN family cysteine cluster protein Morganella morganii S2
2 group_658 NLDBIP_00725 149045 149491 -1 ycgN YcgN family cysteine cluster protein Morganella morganii S4
3 group_658 LHKJJB_01310 243194 243640 1 ycgN YcgN family cysteine cluster protein Morganella morganii S3
4 group_658 HKOGLL_01350 248705 249151 1 ycgN YcgN family cysteine cluster protein Morganella morganii S5
5 group_658 F4V73_RS04635 979622 980068 1 YcgN family cysteine cluster protein Morganella psychrotolerans
6 group_658 PMI_RS05665 1234045 1234488 1 YcgN family cysteine cluster protein Proteus mirabilis HI4320