COG2969


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2969, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Stringent starvation protein B, binds SsrA peptide
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG2969 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_715 FBDBKF_03115 26300 26788 -1 sspB ClpXP protease specificity-enhancing factor Morganella morganii S1
1 group_715 EHELCC_07420 220315 220803 1 sspB ClpXP protease specificity-enhancing factor Morganella morganii S2
2 group_715 NLDBIP_07745 220188 220676 1 sspB ClpXP protease specificity-enhancing factor Morganella morganii S4
3 group_715 LHKJJB_07280 183934 184422 1 sspB ClpXP protease specificity-enhancing factor Morganella morganii S3
4 group_715 HKOGLL_03650 48965 49453 -1 sspB ClpXP protease specificity-enhancing factor Morganella morganii S5
5 group_715 F4V73_RS11805 510491 510982 1 sspB ClpXP protease specificity-enhancing factor Morganella psychrotolerans
6 group_715 PMI_RS18270 4007196 4007705 1 sspB ClpXP protease specificity-enhancing factor Proteus mirabilis HI4320