COG2878


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2878, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfB subunit
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG2878 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_926 FBDBKF_05030 11537 12145 1 rsxB electron transport complex subunit RsxB Morganella morganii S1
1 group_926 EHELCC_12560 169349 169957 -1 rsxB electron transport complex subunit RsxB Morganella morganii S2
2 group_926 NLDBIP_12900 169304 169912 -1 rsxB electron transport complex subunit RsxB Morganella morganii S4
3 group_926 LHKJJB_12760 169349 169957 -1 rsxB electron transport complex subunit RsxB Morganella morganii S3
4 group_926 HKOGLL_11375 169349 169957 -1 rsxB electron transport complex subunit RsxB Morganella morganii S5
5 group_926 F4V73_RS05470 1163274 1163882 1 rsxB electron transport complex subunit RsxB Morganella psychrotolerans
6 group_926 PMI_RS06295 1379577 1380203 1 rsxB electron transport complex subunit RsxB Proteus mirabilis HI4320