COG2875


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2875, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Precorrin-4 methylase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG2875 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3087 FBDBKF_18885 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S1
1 group_3087 EHELCC_17080 21222 22001 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S2
2 group_3087 NLDBIP_18460 21221 22000 -1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S4
3 group_3087 LHKJJB_09165 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S3
4 group_3087 HKOGLL_08715 170329 171108 1 cbiF cobalt-precorrin-4 methyltransferase Morganella morganii S5
5 group_3087 F4V73_RS13710 377873 378652 1 cobalt-precorrin-4 methyltransferase Morganella psychrotolerans