COG2853


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2853, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG2853 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_379 FBDBKF_14380 77059 77817 -1 mlaA phospholipid-binding lipoprotein MlaA Morganella morganii S1
1 group_379 EHELCC_07900 39168 39926 1 mlaA phospholipid-binding lipoprotein MlaA Morganella morganii S2
2 group_379 NLDBIP_08225 39168 39926 1 mlaA phospholipid-binding lipoprotein MlaA Morganella morganii S4
3 group_379 LHKJJB_06040 217233 217991 -1 mlaA phospholipid-binding lipoprotein MlaA Morganella morganii S3
4 group_379 LHKJJB_19950 6 224 1 vacJ VacJ lipoprotein Morganella morganii S3
5 group_379 HKOGLL_04875 23759 24517 1 mlaA phospholipid-binding lipoprotein MlaA Morganella morganii S5
6 group_379 F4V73_RS02525 532741 533499 1 mlaA phospholipid-binding lipoprotein MlaA Morganella psychrotolerans
7 group_379 PMI_RS08880 1942431 1943174 -1 mlaA phospholipid-binding lipoprotein MlaA Proteus mirabilis HI4320