COG2842


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2842, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Bacteriophage DNA transposition protein, AAA+ family ATPase
Function(s) descr. Mobilome: prophages, transposons (X)

Occurence in the database

COG2842 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_35 FBDBKF_15685 72308 73216 1 AAA family ATPase Morganella morganii S1
1 group_35 FBDBKF_20285 4208 4672 -1 Transposase Morganella morganii S1
2 group_35 EHELCC_16040 71608 72516 1 AAA family ATPase Morganella morganii S2
3 group_35 EHELCC_19085 12488 12952 1 Transposase Morganella morganii S2
4 group_35 NLDBIP_16325 8147 9055 -1 AAA family ATPase Morganella morganii S4
5 group_35 NLDBIP_19560 5771 6235 1 Transposase Morganella morganii S4
6 group_35 LHKJJB_16475 71608 72516 1 AAA family ATPase Morganella morganii S3
7 group_35 LHKJJB_19505 4208 4672 -1 Transposase Morganella morganii S3
8 group_35 HKOGLL_16245 71608 72516 1 AAA family ATPase Morganella morganii S5
9 group_35 HKOGLL_19440 5771 6235 1 Transposase Morganella morganii S5