COG2820


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2820, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uridine phosphorylase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG2820 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_409 FBDBKF_16960 19501 20256 -1 udp uridine phosphorylase Morganella morganii S1
1 group_409 EHELCC_16630 48254 49009 1 udp uridine phosphorylase Morganella morganii S2
2 group_409 NLDBIP_16840 48254 49009 1 udp uridine phosphorylase Morganella morganii S4
3 group_409 LHKJJB_16630 19501 20256 -1 udp uridine phosphorylase Morganella morganii S3
4 group_409 HKOGLL_17595 19501 20256 -1 udp uridine phosphorylase Morganella morganii S5
5 group_409 F4V73_RS18430 19829 20584 -1 udp uridine phosphorylase Morganella psychrotolerans
6 group_409 PMI_RS17555 3854459 3855217 1 udp uridine phosphorylase Proteus mirabilis HI4320