COG2813


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2813, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 16S rRNA G1207 methylase RsmC
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG2813 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2319 FBDBKF_17810 23506 24519 1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella morganii S1
1 group_2319 EHELCC_09835 202938 203951 1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella morganii S2
2 group_2319 NLDBIP_10215 202938 203951 1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella morganii S4
3 group_2319 LHKJJB_07540 13287 14300 -1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella morganii S3
4 group_2319 HKOGLL_07090 13287 14300 -1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella morganii S5
5 group_2319 F4V73_RS15155 10675 11688 -1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Morganella psychrotolerans
6 group_2319 PMI_RS12335 2733887 2734900 1 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC Proteus mirabilis HI4320