COG2201


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2201, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG2201 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_481 FBDBKF_00770 139408 140475 -1 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains Morganella morganii S1
1 group_481 EHELCC_00775 168393 169460 1 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains Morganella morganii S2
2 group_481 NLDBIP_02685 510676 511743 -1 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains Morganella morganii S4
3 group_481 LHKJJB_04200 117917 118984 -1 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains Morganella morganii S3
4 group_481 HKOGLL_02845 168598 169665 1 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains Morganella morganii S5
5 group_481 F4V73_RS06770 1404354 1405421 -1 chemotaxis response regulator protein-glutamate methylesterase Morganella psychrotolerans
6 group_481 PMI_RS08120 1773659 1774711 -1 chemotaxis response regulator protein-glutamate methylesterase Proteus mirabilis HI4320