COG2185


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2185, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG2185 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2727 FBDBKF_07465 5354 5794 1 glmS methylaspartate mutase subunit S Morganella morganii S1
1 group_2727 EHELCC_17135 33004 33444 1 glmS methylaspartate mutase subunit S Morganella morganii S2
2 group_2727 NLDBIP_13740 423 863 1 glmS methylaspartate mutase subunit S Morganella morganii S4
3 group_2727 LHKJJB_09110 158886 159326 -1 glmS methylaspartate mutase subunit S Morganella morganii S3
4 group_2727 HKOGLL_08660 158886 159326 -1 glmS methylaspartate mutase subunit S Morganella morganii S5
5 group_2727 F4V73_RS13650 366061 366504 -1 glmS methylaspartate mutase subunit S Morganella psychrotolerans